rs549051162 chr11:62841550 A>G
- Sequence
taatccaactcaaacaacaagaac[A/G]taactatttagcttgtaccctaac
- ASB in cell types
- TTC-1240 (Rhabdoid tumor of the kidney) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- SMCA4_HUMAN ARID2_HUMAN SMRC1_HUMAN GCR_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA4_HUMAN | 2.12 | -0.50 | 1.20 | n/a | n/a | |||
| ARID2_HUMAN | 1.84 | n/a | 2.00 | n/a | n/a | |||
| SMRC1_HUMAN | 1.73 | -1.12 | 1.00 | n/a | n/a | |||
| GCR_HUMAN | 0.95 | 0.60 | 1.05 | -5.33 | Concordant |
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Motif analysis
