rs552197427 chr9:136631593 C>T
- Sequence
tgttcctggggctgtgctgccctc[C/T]tgtggctgctgacaactccatgtc
- ASB in cell types
- erythroid progenitors
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 3.65 | n/a | 2.00 | 4.24 | Discordant |
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Motif analysis
