rs552987006 chr17:63985234 A>G
- Sequence
gtgtacacacacacacacgcgcgc[A/G]cacacacacacacacacacacaca
- ASB in cell types
- K562 (myelogenous leukemia) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- ZSCA4_HUMAN KAISO_HUMAN SUH_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZSCA4_HUMAN | 2.33 | -3.81 | 1.50 | 0.00 | Weak Discordant | |||
| KAISO_HUMAN | n/a | 2.21 | 2.00 | n/a | No Hit | |||
| SUH_HUMAN | 2.37 | -4.60 | 2.00 | n/a | No Hit |
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Motif analysis
