rs554294243 chr19:16660293 C>A
- Sequence
taggggagcgcgagcgccccacct[C/A]gctggggaggccccgagagccaga
- ASB in cell types
- ID00014 (lymphoblastoid cell, DiGeorge syndrome)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.10 | -0.97 | 1.00 | 1.98 | Weak Discordant |
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Motif analysis
