rs554409853 chr15:52466429 A>C
- Sequence
ggtgtagtattgagctgcacagtg[A/C]ctcctatagcccaagactgcactg
- ASB in cell types
- GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.14 | 1.14 | 1.00 | 2.72 | Concordant | |||
| STAG1_HUMAN | -0.91 | 0.91 | 1.00 | n/a | n/a |
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Motif analysis
