rs5546 chr2:40114248 T>C

Sequence
tgttcagtcatgactggaacagga[T/C]tgtgcaagccatggatgcctttga
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.78 -0.17 2.8·10-91.00 1.62 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (geographic atrophy)
GTEx eQTL Brain_Caudate_basal_ganglia

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