rs554706852 chr1:15820981 A>C
- Sequence
gaccctgtctcaaaaaaaaaaaaa[A/C]aaaaaactgaaaacatccagcata
- ASB in cell types
- 22RV1 (prostate carcinoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- ANDR_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.59 | -0.73 | 2.50 | 1.07 | Weak Discordant | |||
| GCR_HUMAN | -0.48 | 1.93 | 1.00 | n/a | No Hit |
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Motif analysis
