rs554799884 chr8:143952208 A>G
- Sequence
acacacacacacacacacacacac[A/G]cgcgcgcacacacgcacgcgcacg
- ASB in cell types
- K562 (myelogenous leukemia) HUVEC-C (HUVEC, umbilical vein endothelial cells) MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- NRF1_HUMAN TF65_HUMAN VEZF1_HUMAN BRD4_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | 1.81 | n/a | 2.33 | 1.23 | Weak Discordant | |||
| TF65_HUMAN | 1.92 | n/a | 2.00 | n/a | No Hit | |||
| VEZF1_HUMAN | 1.71 | -3.77 | 2.00 | n/a | No Hit | |||
| BRD4_HUMAN | 1.98 | -1.84 | 1.50 | n/a | n/a |
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Motif analysis
