rs555222320 chr12:75892962 C>G
- Sequence
ttcccttctcttcctttataaacc[C/G]ccccccgccacatgcattctttga
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MTG16_HUMAN HDAC2_HUMAN NCOR1_HUMAN HTF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTG16_HUMAN | n/a | 0.74 | 2.00 | n/a | n/a | |||
| HDAC2_HUMAN | n/a | 1.47 | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | -4.37 | 1.26 | 2.00 | n/a | n/a | |||
| HTF4_HUMAN | n/a | 1.68 | 2.00 | n/a | No Hit | |||
| ATF7_HUMAN | -4.75 | 2.65 | 2.00 | n/a | No Hit |
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Motif analysis
