rs555448454 chr2:219111666 G>C
- Sequence
cacacacacacacacacacacaga[G/C]agatacatacagtcagtgggaaag
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.69 | -5.02 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.67 | n/a | 2.00 | 0.58 | Weak Discordant |
Items per page:
1 – 2 of 2
Motif analysis
