rs556157869 chr1:940256 C>T
- Sequence
gctggccgcgcgggggaggggcgc[C/T]ggccgccggggagcgcgctgtcaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MEIS2_HUMAN ZN148_HUMAN VEZF1_HUMAN CTBP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEIS2_HUMAN | n/a | 4.06 | 1.50 | n/a | No Hit | |||
| ZN148_HUMAN | 3.32 | -3.08 | 1.00 | 1.59 | Weak Discordant | |||
| VEZF1_HUMAN | 3.04 | n/a | 1.50 | -0.13 | Weak Concordant | |||
| CTBP1_HUMAN | -2.76 | 2.85 | 1.00 | n/a | n/a | |||
| SKIL_HUMAN | -2.66 | 2.57 | 1.00 | n/a | n/a |
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Motif analysis
