rs55635040 chr3:133480636 T>C
- Sequence
attctcattcctgtttcagcccca[T/C]gcaaatcaaggcaagtgaccaggc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN STAG1_HUMAN IKZF2_HUMAN ARI3A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.57 | -1.32 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | 1.76 | -1.29 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | 1.58 | -1.11 | 1.00 | n/a | n/a | |||
| ARI3A_HUMAN | 2.56 | n/a | 1.00 | n/a | n/a |
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