rs55636938 chr5:160199549 C>G
- Sequence
gccaggtcgcggcatcccggctcc[C/G]cgtcggcctggggccggcgggcgg
- ASB in cell types
- HEK293 (embryonic kidney) neural cell macrophages form periferal blood A549 (lung carcinoma)
- ASB for transcription factors
- SPI1_HUMAN SMC3_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.90 | 0.28 | 2.00 | n/a | No Hit | |||
| SMC3_HUMAN | 0.32 | 1.12 | 1.95 | n/a | n/a | |||
| STAT1_HUMAN | 2.13 | -1.40 | 2.00 | n/a | No Hit |
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