rs55638790 chr2:10340263 C>T
- Sequence
ctgatcccagttacctttcttgaa[C/T]gggaaagatatcaatgcttccttc
- ASB in cell types
- K562 (myelogenous leukemia) SET2 (Adult acute megakaryoblastic leukemia, Homo Sapiens)
- ASB for transcription factors
- STAT1_HUMAN BCOR_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.70 | -1.51 | 1.00 | n/a | No Hit | |||
| BCOR_HUMAN | 2.59 | n/a | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | 2.18 | -4.99 | 2.00 | n/a | n/a |
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