ADASTRA v6.1.1
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rs55639542
chr9:2602036
C
>
T
Sequence
tcttggggtttatgttctcccagt[C/T]atttccccttctgattctctgttt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
RAD51_HUMAN
COE1_HUMAN
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD51_HUMAN
3.52
-3.20
2.1·10
-9
1.00
1.00
n/a
n/a
COE1_HUMAN
2.95
-4.89
3.0·10
-4
1.00
1.50
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adrenal_Gland
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2025.04.22 v6.1.1 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)