rs55646238 chr12:52149001 C>T
- Sequence
tgtgtgaccttggccaggtgaccc[C/T]tccttcctaagcctgaactttctc
- ASB in cell types
- BEAS-2B (bronchial epithelium) MDA-MB-231ERb(triple negative breast cancer)
- ASB for transcription factors
- GCR_HUMAN ESR2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 0.28 | 1.36 | 1.00 | n/a | No Hit | |||
| ESR2_HUMAN | -0.00 | 0.97 | 1.00 | n/a | No Hit |
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