rs55652937 chr3:58560887 G>C
- Sequence
actagcaggagtgaggtggttact[G/C]gtttagtgggtctttggaggcact
- ASB in cell types
- epithelial cell of prostate WA09 (embryonic stem cells) VCaP (prostate carcinoma)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 2.28 | 0.00 | 1.36 | n/a | n/a | |||
| CTCF_HUMAN | 0.99 | 0.82 | 1.20 | n/a | No Hit |
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