rs55653122 chr5:178204467 G>A
- Sequence
gacggacttgagcagccaatgagt[G/A]tgcagtttgttgcgatgtggcacc
- ASB in cell types
- primary B-CLL cells K562 (myelogenous leukemia) 22RV1 (prostate carcinoma) MDA-MB-231 (breast adenocarcinoma)
- ASB for transcription factors
- BRD4_HUMAN CDN1B_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 1.96 | 0.61 | 1.58 | n/a | n/a | |||
| CDN1B_HUMAN | 1.48 | -0.10 | 2.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.71 | -0.31 | 2.00 | n/a | No Hit |
Items per page:
1 – 3 of 3