rs55654955 chr7:69670730 T>C
- Sequence
atctctacaaaaagattaaaaaat[T/C]agccaagtgtggctttccaactac
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- OSR2_HUMAN IKZF2_HUMAN ZBT17_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| OSR2_HUMAN | -4.64 | 2.88 | 1.50 | -3.24 | Discordant | |||
| IKZF2_HUMAN | -1.78 | 2.09 | 1.00 | n/a | n/a | |||
| ZBT17_HUMAN | -2.41 | 2.65 | 1.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
