rs55658365 chr14:93962865 C>T
- Sequence
cttgtggcctgtcttccgctgaac[C/T]ggccagaacaggaaccagggccac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes primary B-CLL cells MDM(monocyte derived macrophages)
- ASB for transcription factors
- STAT1_HUMAN BRD4_HUMAN SRF_HUMAN SPI1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.32 | -0.16 | 1.67 | n/a | No Hit | |||
| BRD4_HUMAN | 2.31 | n/a | 2.00 | n/a | n/a | |||
| SRF_HUMAN | -2.06 | 2.44 | 1.00 | 1.62 | Weak Concordant | |||
| SPI1_HUMAN | 1.00 | -0.08 | 1.90 | n/a | No Hit |
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Motif analysis
