rs55661613 chr15:85251104 T>C
- Sequence
tggtggatttcacgaggactgcca[T/C]ggcgcctatggagtatagtccggc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) epithelial cell of prostate pancreas MCF7L-P(immortalized breast epithelial cell line)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN TRI22_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.09 | 0.23 | 1.41 | n/a | No Hit | |||
| RAD21_HUMAN | 2.07 | -0.66 | 1.39 | n/a | n/a | |||
| TRI22_HUMAN | 2.82 | -2.71 | 1.00 | n/a | n/a |
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