rs55662787 chr2:164818783 C>T
- Sequence
cttatgtaaacatatatatatata[C/T]atataattttttttcgagatcttg
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.32 | -4.55 | 2.00 | -0.15 | Weak Concordant |
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Motif analysis
