rs55664305 chr19:4851770 T>C

Sequence
gagggctgtgggcagagggacggg[T/C]tctgactcaggtggtcacaggcgc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) keratinocytes epidermal keratinocytes
ASB for transcription factors
SNAI2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN n/a 2.98 1.002.8·10-5 1.50 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Caudate_basal_ganglia

Download