rs55672855 chr2:240560414 A>T
- Sequence
gcggggaggacggcgcccggggac[A/T]gagaacatgggacgcagagcggtc
- ASB in cell types
- 22RV1 (prostate carcinoma) breast tumor primary B-CLL cells neural cell
- ASB for transcription factors
- ANDR_HUMAN ESR1_HUMAN BRD4_HUMAN BRD2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.74 | n/a | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 3.30 | -0.78 | 2.00 | n/a | No Hit | |||
| BRD4_HUMAN | 2.05 | 0.17 | 1.40 | n/a | n/a | |||
| BRD2_HUMAN | 0.40 | 1.10 | 1.25 | n/a | n/a |
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