rs55673270 chr9:132500385 C>T
- Sequence
caccgtatgccgaggtttcagtga[C/T]gtaatgcatataaaaacctgagca
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ATF2_HUMAN ATF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | 3.32 | -3.73 | 1.00 | 0.93 | Weak Discordant | |||
| ATF7_HUMAN | 3.21 | -2.88 | 1.00 | -1.19 | Weak Concordant |
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Motif analysis
