rs55675314 chr8:143844060 A>G
- Sequence
catacagagataggagctaagggg[A/G]catagtgaggagtaaccagaagac
- ASB in cell types
- GM10847 (female B-cells Lymphoblastoid Cell Lines) GM12891 (male B- cells lymphoblastoid cell line) GM19193 (female B-cells Lymphoblastoid Cell Lines) GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN ZN654_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.88 | -2.04 | 1.18 | n/a | No Hit | |||
| STAG1_HUMAN | 3.16 | -3.63 | 1.17 | n/a | n/a | |||
| ZN654_HUMAN | 2.44 | n/a | 1.33 | n/a | n/a |
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