rs55676305 chr4:49156142 A>C
- Sequence
cactcgggttgactccattccatg[A/C]cattgcattccattcctttctatt
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells lymphoblastoid cell line) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- TBX3_HUMAN FOXK2_HUMAN FOXP1_HUMAN ATF7_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX3_HUMAN | -2.06 | 3.02 | 1.50 | n/a | No Hit | |||
| FOXK2_HUMAN | -2.19 | 2.42 | 1.00 | n/a | No Hit | |||
| FOXP1_HUMAN | -3.01 | 2.89 | 1.00 | n/a | No Hit | |||
| ATF7_HUMAN | -2.69 | 2.77 | 1.00 | n/a | No Hit |
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