rs55677374 chr15:59562856 C>T
- Sequence
gtgttttgtgatatgtgttgcaaa[C/T]accatctccgcctctggctagtct
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) HeLa S3 (cervical adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.50 | 0.84 | 1.13 | n/a | No Hit |
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