rs55679729 chr1:40820951 G>A
- Sequence
aactccttgcaggaaatgcttcag[G/A]gaatactggcccagtccacctctg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN ZNF24_HUMAN SMCE1_HUMAN ARI1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.92 | n/a | 1.25 | n/a | n/a | |||
| ZNF24_HUMAN | 1.12 | 0.26 | 1.00 | n/a | No Hit | |||
| SMCE1_HUMAN | 1.23 | -1.23 | 1.00 | n/a | n/a | |||
| ARI1B_HUMAN | 0.36 | -0.36 | 1.00 | n/a | n/a |
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