rs55686872 chr12:83806014 A>T
- Sequence
acgaggtcatactgaagaagggtg[A/T]gtccctaatccaatatgattggta
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN GATA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.25 | 2.03 | 2.03 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.20 | 1.80 | 1.84 | n/a | No Hit | |||
| GATA3_HUMAN | -0.48 | 2.06 | 2.00 | n/a | No Hit |
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