rs55688149 chr3:129623626 G>A

Sequence
aggccaggtccggctgacccctac[G/A]tagggactgggtgcctcccccttc
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells) breast tumor
ASB for transcription factors
TF65_HUMAN ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 2.44 n/a 6.4·10-41.00 2.50 n/a No Hit
ESR1_HUMAN 2.27 0.35 0.051.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Sun_Exposed_Lower_leg Thyroid

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