rs55691656 chr17:68794933 C>T

Sequence
gctctcattgcttccagaacacag[C/T]cctactttctcccattctgaattt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) GM18486 (Lymphoblastoid Cell Lines)
ASB for transcription factors
STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 0.16 0.86 1.000.02 1.00 n/a n/a
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GTEx eQTL Nerve_Tibial Skin_Sun_Exposed_Lower_leg Spleen

Download