rs55698590 chr5:147669179 A>G
- Sequence
ccctttgaaaatacaatcctattt[A/G]tttataataaaagtgctttatgac
- ASB in cell types
- 22RV1 (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.01 | 0.92 | 1.49 | 0.94 | Weak Concordant |
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Motif analysis
