rs55717385 chr16:47493190 C>T
- Sequence
tggggacctctttatgcttgctgt[C/T]tcattcctgaaatgaggccagtac
- ASB in cell types
- K562 (myelogenous leukemia) MDM(monocyte derived macrophages)
- ASB for transcription factors
- TAF9B_HUMAN SPI1_HUMAN REQU_HUMAN NFIC_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TAF9B_HUMAN | 2.47 | n/a | 2.00 | n/a | n/a | |||
| SPI1_HUMAN | 1.11 | 0.88 | 1.77 | n/a | No Hit | |||
| REQU_HUMAN | 2.84 | 0.64 | 2.00 | n/a | n/a | |||
| NFIC_HUMAN | 1.85 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Lung, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Testis