rs55719924 chr17:38454732 G>A

Sequence
ggtagggtgtgagtcacagtgggc[G/A]ccatgcccggcctgaacactgtgc
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells) HCT-116 (colon carcinoma)
ASB for transcription factors
TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 3.30 0.49 7.8·10-30.96 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic

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