rs55724477 chr19:13152241 C>G

Sequence
gcggcagccacgtgttcacgggga[C/G]tgtcgtgcgcgccgggttcgcagc
ASB in cell types
K562 (myelogenous leukemia) MDA-MB-231 (breast adenocarcinoma) HEK293 (embryonic kidney) HCT-116 (colon carcinoma)
ASB for transcription factors
BRD2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD2_HUMAN 1.77 0.12 1.3·10-31.00 2.14 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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