ADASTRA v6.1.1
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rs55724477
chr19:13152241
C
>
G
Sequence
gcggcagccacgtgttcacgggga[C/G]tgtcgtgcgcgccgggttcgcagc
ASB in cell types
K562 (myelogenous leukemia)
MDA-MB-231 (breast adenocarcinoma)
HEK293 (embryonic kidney)
HCT-116 (colon carcinoma)
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(+2 others)
ASB for transcription factors
BRD2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD2_HUMAN
1.77
0.12
1.3·10
-3
1.00
2.14
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL
Artery_Aorta
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2025.04.22 v6.1.1 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)