rs55727431 chr6:17015361 G>C
- Sequence
acagctctcaaggcagcttgtctg[G/C]agttactcatttctccctgtgggt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CAR-T cells
- ASB for transcription factors
- IRF4_HUMAN TBX21_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IRF4_HUMAN | 1.64 | -0.96 | 1.00 | n/a | No Hit | |||
| TBX21_HUMAN | 2.30 | n/a | 1.50 | n/a | No Hit | |||
| IKZF2_HUMAN | 2.30 | n/a | 1.50 | n/a | n/a |
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