rs55735944 chr13:113002428 C>T
- Sequence
gctgcggctcctccttggagggga[C/T]gcctggccactgctgtccccacaa
- ASB in cell types
- HEK293 (embryonic kidney) HCT-116 (colon carcinoma)
- ASB for transcription factors
- ZBT17_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT17_HUMAN | -2.21 | 3.00 | 2.00 | n/a | No Hit | |||
| RAD21_HUMAN | 1.78 | 0.93 | 1.00 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hypothalamus, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Liver, Lung, Pancreas, Pituitary, Skin_Sun_Exposed_Lower_leg, Spleen