rs557398636 chr1:16621132 C>G
- Sequence
agtcagcacgcccggccaagccac[C/G]ccttctttaagagcttcaccatag
- ASB in cell types
- foreskin keratinocyte HCASMC (Human coronary artery smooth muscle cells) MCF10AT1 (breast premetastatic epithelial cells) testis
- ASB for transcription factors
- CTCF_HUMAN JUND_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.76 | 0.13 | 2.73 | n/a | No Hit | |||
| JUND_HUMAN | 2.00 | n/a | 1.33 | n/a | No Hit |
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