rs55740103 chr9:92115434 A>G
- Sequence
tcccaaaagtgcgcgtcgctgctc[A/G]gtgtcgttatcacctccgcagagg
- ASB in cell types
- HepG2 (hepatoblastoma) CD14+ monocytes adult erythroblasts
- ASB for transcription factors
- CREB1_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | 2.14 | -0.31 | 1.71 | n/a | No Hit | |||
| STAT1_HUMAN | 2.25 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Lung, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis