rs55748177 chr7:121075773 G>T

Sequence
tgcatgatagtaagtgatgaaata[G/T]gctgaaatctacatatattttaca
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ATF3_HUMAN COT1_HUMAN TIF1A_HUMAN EP400_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF3_HUMAN 3.07 -5.41 3.4·10-31.00 2.00 n/a No Hit
COT1_HUMAN 2.25 n/a 4.2·10-31.00 2.00 n/a No Hit
TIF1A_HUMAN 2.40 -5.12 7.4·10-31.00 2.25 n/a n/a
EP400_HUMAN 2.10 n/a 0.021.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts

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