rs55750558 chr2:179098294 C>T
- Sequence
caccaaaaatagaattctgaacca[C/T]tggctctaaattatgaaaccccaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- MEF2B_HUMAN ZN687_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | 2.75 | -2.55 | 1.00 | n/a | No Hit | |||
| ZN687_HUMAN | 2.22 | -1.91 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | 1.59 | -0.94 | 1.00 | n/a | n/a |
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