rs55754816 chr2:227406248 C>T
- Sequence
tgcattagcaggtgctggaaacta[C/T]gttgccaaatgtgtcgtagacaca
- ASB in cell types
- epidermal keratinocytes BEAS-2B (bronchial epithelium) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- GCR_HUMAN TCF21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.27 | 0.21 | 1.00 | n/a | No Hit | |||
| TCF21_HUMAN | 1.53 | n/a | 3.00 | n/a | No Hit |
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