rs55771329 chr10:123643610 C>T
- Sequence
gggtgtctgtgtcccccgctgccc[C/T]ctggcgaaagcggctggtggagcc
- ASB in cell types
- GM19239 (male B-cells lymphoblastoid cell line) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.02 | 1.64 | 1.33 | -0.92 | Weak Discordant |
Items per page:
1 – 1 of 1
Motif analysis
