rs55771412 chr19:46532466 G>C

Sequence
ccacgctggtctcaaactcctgac[G/C]tcaagtgatccgcctgcctcggcc
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZBT11_HUMAN ZN426_HUMAN ZF64B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZBT11_HUMAN n/a 2.94 1.008.2·10-3 2.00 n/a n/a
ZN426_HUMAN -2.48 1.62 1.000.01 1.50 n/a n/a
ZF64B_HUMAN -1.86 2.66 1.000.03 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Cells_Cultured_fibroblasts Liver Thyroid

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