rs55773526 chr13:98918968 C>G
- Sequence
atccgatctaccagcacaggaaat[C/G]atgcaatgacgtccaaaactgatg
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- FLI1_HUMAN ETS1_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FLI1_HUMAN | -1.86 | 1.94 | 1.00 | 1.87 | Weak Concordant | |||
| ETS1_HUMAN | -1.84 | 2.07 | 1.00 | 2.97 | Concordant | |||
| SMCA4_HUMAN | -0.11 | 1.49 | 1.00 | n/a | n/a |
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Motif analysis
