rs55776162 chr18:8606317 A>G
- Sequence
aagatgagaattgggtggggatac[A/G]gccaaaccacatcatccacctcag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN ATF7_HUMAN TRI22_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 3.05 | -3.25 | 2.00 | n/a | n/a | |||
| ATF7_HUMAN | 2.69 | -2.43 | 1.00 | n/a | No Hit | |||
| TRI22_HUMAN | 2.18 | -1.32 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | 1.43 | -2.76 | 1.50 | n/a | n/a | |||
| NFAC3_HUMAN | 2.54 | -2.26 | 1.00 | n/a | No Hit |
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