rs55776550 chr1:42961944 G>A
- Sequence
ggatgtttataaaggcttagctat[G/A]taaactgtactcattcttgacgtg
- ASB in cell types
- ZR-75-1 (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.42 | -0.25 | 1.50 | -1.87 | Weak Concordant |
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Motif analysis
