rs55781615 chr18:79601400 G>A
- Sequence
tctgcacaataagacttggtctcc[G/A]cagtcctttatctcaacctcgcat
- ASB in cell types
- K562 (myelogenous leukemia) embryonic stem cells derived definitive endoderm MOLT-4 (Adult T acute lymphoblastic leukemia) Jurkat (T-cells)
- ASB for transcription factors
- CDK9_HUMAN GATA6_HUMAN NFIC_HUMAN MYB_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK9_HUMAN | 1.48 | -0.05 | 2.00 | n/a | n/a | |||
| GATA6_HUMAN | 1.36 | 0.28 | 1.00 | n/a | No Hit | |||
| NFIC_HUMAN | -0.77 | 0.77 | 1.00 | n/a | No Hit | |||
| MYB_HUMAN | 1.57 | -0.87 | 1.50 | n/a | No Hit |
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