rs557843082 chr2:64865707 C>T
- Sequence
cccacgccaggccacacgcccagg[C/T]ggccgcggcctcggcggcggcgca
- ASB in cell types
- transverse colon A549 (lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.41 | 1.16 | 1.05 | 1.34 | Weak Concordant |
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Motif analysis
